PhD Alumni

This list reflects the amazing and varied research that the PhD students in the Department of Computer Science have done over many years. However, we are aware that the list is incomplete, and we would be delighted to add more names and thesis titles to the list. In addition, you may find that a correction is needed in your listing. In either case, please contact the CS staff at csadmin@cs.tufts.edu to add or update information.

2020s

  • Gabriel Appleby

    • PhD in Computer Science
    • Dissertation Title: Towards the Usability of Dimensionality Reduction for Visual Analytics

    Hafiz Mohsin Bashir

    • PhD in Computer Science
    • Dissertation Title: Improving the Performance of Cloud Applications: A Multi-layered Approach 

    Jared Chandler

    • PhD in Computer Science
    • Dissertation Title: A Semantic Approach to Automatic Protocol Reverse Engineering

    Emily Holt

    • PhD in Computer Science
    • Dissertation Title: Data-Driven, Multidisciplinary Strategies to Evaluating Impacts of Renewable Energy Policies

    Zhe Huang

    • PhD in Computer Science
    • Dissertation Title: Deep Learning with Limited Labeled Data: New Methods and Applications to Echocardiography

    Nicholas Rabb

    • PhD in Computer Science and Cognitive Science
    • Dissertation Title: Modeling Media Influence on the Formation of Misinformed Attitudes

    Preetish Rath

    • PhD in Computer Science
    • Dissertation Title: Time Series Machine Learning for Hospitalized Patient Monitoring: Addressing Missing Data, Missing Labels, And High False Alarm Rates

    Gyan Tatiya

    • PhD in Computer Science
    • Dissertation Title: Multi-modal Knowledge Transfer Across Heterogeneous Robots
  • Tooba Ahsen

    • PhD in Computer Science
    • Dissertation Title: Exploring the Use of Augmented Reality Technology in Challenging Scenarios

    David Buckingham

    • PhD in Computer Science
    • Dissertation Title: Multiagent Epistemic Cooperation-Agnostic Planning

    Kapil Devkota

    • PhD in Computer Science
    • Dissertation Title: Computational Methods for the Prediction and Analysis of Protein-Protein Interaction Networks 

    Theresa Law

    • PhD in Computer Science: Cognitive Science
    • Dissertation Title: Examining Trust in Human-Robot Interaction

    Jeanne-Marie Musca

    • PhD in Computer Science
    • Dissertation Title: Match-Reference Regular Expressions and Match-Reference Bijective Lenses

    Monsurat Olaosebikan

    • PhD in Computer Science
    • Dissertation Title: Designing Immersive Tools for Supporting Remote Scientific Collaboration and Learning

    Ashley Suh

    • PhD in Computer Science
    • Dissertation Title: From Exploratory to Hypothesis-Driven Visual Data Analysis (April 2023)
  • Matthew Ahrens

    • PhD in Computer Science
    • Dissertation Title: Teaching with Student Agency for Self-efficacy to Learn PL Concepts Across Experience Levels

    Tyler Frasca

    • PhD in Computer Science: Human-Robot Interaction
    • Dissertation Title: Designing Versatile Robots that Learn, Assess, and Modify Tasks

    Evana Gizzi

    • PhD in Computer Science and Cognitive Science
    • Dissertation Title: Creative Problem Solving in Intelligent Agents: Domain-Agnostic Methods for Novelty

    Daniel Kasenberg

    • PhD in Computer Science and Cognitive Science
    • Dissertation Title: Planning and Explanatory Dialogue with Temporal Logic Norms

    Samuel Lasser

    • PhD in Computer Science
    • Dissertation Title: Formal Verification of Top-Down Parser Interpreters

    Xinmeng Li

    • PhD in Computer Science
    • Dissertation Title: Developing Machine Learning Models with Heterogeneous Data for Biological Engineering Applications

    Linfeng Liu

    • PhD in Computer Science
    • Dissertation Title: Learning from Relational Data via Graph Neural Networks
  • Karl Cronburg

    • PhD in Computer Science
    • Dissertation Title: DSLs, Annotations, and Dynamic Instrumentation: Specifying the Memory Layout of a Memory Manager to Detect Bugs with Typestate

    Osama Haq

    • PhD in Computer Science
    • Dissertation Title: Rethinking Network Qualify of Service in the Cloud Era

    Ab Mosca

    • PhD in Computer Science
    • Dissertation Title: Communicating with Visualization: The Importance of Simplicity

    Marianne Procopio

    • PhD in Computer Science
    • Dissertation Title: Progressive Visualization for Big Data Exploratory Analysis

    Sophia Sklaviadis

    • PhD in Computer Science
    • Dissertation Title: Modeling Ancient Greek Syntax with an Unsupervised RNNG
  • Dylan Cashman

    • PhD in Computer Science
    • Dissertation Title: Bridging the Human-Machine Gap in Applied Machine Learning with Visual Analytics

    Diogenes Nunez

    • PhD in Computer Science
    • Dissertation Title: Reducing Garbage Collection Costs using Application-Specific Information

    Christopher Michael Pietras

    • PhD in Computer Science
    • Dissertation Title: Characterizing Pathway-Specific Anomalies in Temporal Patterns of Gene Expression

    Vasanth Sarathy

    • PhD in Computer Science: Cognitive Science
    • Dissertation Title: Creative Problem Solving

2010s

  • Sara Amr Amin

    • PhD in Computer Science
    • Dissertation Title: Advancing the Prediction of Unexpected Cellular Behavior due to Enzyme Promiscuity and Enzyme Solubility

    Hao Cui

    • PhD in Computer Science
    • Dissertation Title: Aggregate Simulation for Efficient Planning and Inference

    Giordano Ferreira

    • PhD in Computer Science
    • Dissertation Title: Spatial Interactive Agent-based Models at Multiple Levels of Biological Organization

    Samuel Hincks

    • PhD in Computer Science
    • Dissertation Title: The Physical Paradigm for Bidirectional Brain-Computer Interfaces

    Hu Huang

    • PhD in Computer Science
    • Dissertation Title: Detecting Semantic Bugs in Autopilots by Monitoring Relevant Variables via Machine Learning

    Sepideh Sadeghi

    • PhD in Computer Science: Cognitive Science
    • Dissertation Title: Incremental and Memory-Limited Probabilistic Generative Models of Early Word Learning

    Rishit Sheth

    • PhD in Computer Science
    • Dissertation Title: Algorithms and Theory for Variational Inference in Two-level Non-conjugate Models
  • Hugo Alves Akitaya

    • PhD in Computer Science
    • Dissertation Title: Recognizing Weak Embeddings
  • Bilal Ahmed

    • PhD in Computer Science
    • Dissertation Title: Decrypting Cryptogenic Epilepsy: Machine Learning Methods for Detecting Malformations

    Gordon Briggs

    • PhD in Computer Science: Cognitive Science
    • Dissertation Title: Toward Dialogue and Reasoning Mechanisms to Enable More Natural and Socially-Appropriate Human-Robot Interactions

    Mengfei Cao

    • PhD in Computer Science
    • Dissertation Title: New Graph Metrics Improve Network-Based Protein Function Prediction
  • Evan Peck

    • PhD in Computer Science
    • Dissertation Title: Designing Brain-Computer Interfaces for Intelligent Information Delivery Systems

    Ehsan Ullah

    • PhD in Computer Science
    • Dissertation Title: Pathway Analysis of Metabolic Networks using Graph Theoretical Approaches

    Andrew Winslow

    • PhD in Computer Science
    • Dissertation Title: Staged Self-Assembly and Polyomino Context-Free Grammars
  • R. Jordan Crouser

    • PhD in Computer Science
    • Dissertation Title: Toward Theoretical Measures for Systems Involving Human Computation

    Noah Manus Daniels

    • PhD in Computer Science
    • Dissertation Title: Remote Homology Detection in Proteins using Graphical Models
  • Edward Aftandilian

    • PhD in Computer Science
    • Dissertation Title: Finding High-Level Bugs Using Low-Overhead Dynamic Analysis Tools

    Erin Solovey

    • PhD in Computer Science
    • Dissertation Title: Real-time fNIRS Brain Input for Enhancing Interactive System

    Amelio A Vazquez-Reina

    • PhD in Computer Science
    • Dissertation Title: Segmentation Strategies for Connectomics

    Byron Wallace

    • PhD in Computer Science
    • Dissertation Title: Machine Learning in Health Informatics: Making Better use of Domain Experts
  • Marc Chiarini

    • PhD in Computer Science
    • Dissertation Title: Finding Indicators of Load on a Simple Web Server via Analysis of Black-Box Performance Measurements

    Andrew Fox

    • PhD in Computer Science
    • Dissertation Title: Structure and Evolution of Biological Networks: A Systems Biology Approach to Understanding Protein Function

    Mashhood Ishaque

    • PhD in Computer Science
    • Dissertation Title: Geometric Data Structures

    Saket Joshi

    • PhD in Computer Science
    • Dissertation Title: First Order Decision Diagrams for Decision Theoretic Planning

    Nauman Hussain Khan

    • PhD in Computer Science
    • Dissertation Title: Through-Silicon via Analysis for the Design of 3-D Integrated Circuits
  • Leanne Hirshfield

    • PhD in Computer Science
    • Dissertation Title: Enhancing Usability Testing with Functional Near Infrared Spectroscopy

    Rachel Lomasky

    • PhD in Computer Science
    • Dissertation Title: Active Acquisition of Informative Training Data

2000s

  • Michael Horn

    • PhD in Computer Science
    • Dissertation Title: Tangible Computer Programming

    Elena Jakubiak

    • PhD in Computer Science
    • Dissertation Title: An Improved Representation for Stroke-Based Typefaces and a Method for their Creation

    G. Michael Poor

    • PhD in Computer Science
    • Dissertation Title: The Effects of Varying Levels of Reality Based Interaction Styles on a Subjects Ability to Perform a 3D Construction Task
  • Georgios Christou

    • PhD in Computer Science
    • Dissertation Title: CoDeIn - A Knowledge-Based Framework for the Description and Evaluation of Reality-Based Interaction

    Chenggang Wang

    • PhD in Computer Science
    • Dissertation Title: First Order Markov Decision Processes
  • Eynat Krav-Ami Rafalin

    • PhD in Computer Science
    • Dissertation Title: Algorithms and Analysis of Depth Functions using Computation Geometry
  • Marta Arias

    • PhD in Computer Science
    • Dissertation Title: Exact Learning of First-Order Expressions from Queries
  • Michael Jonas

    • PhD in Computer Science
    • Dissertation Title: Modeling Speech using a Partially Observable Markov Decision Process

    Horn-yeu Shiaw

    • PhD in Computer Science
    • Dissertation Title: New Interaction Techniques for the Digital Library: 3D Focus+Context Interactive Visualization
  • Karina Assiter

    • PhD in Computer Science
    • Dissertation Title: Projective Mapping; a faithful mapping algorithm for the layout of multidimensional data
  • Harold Gregory Andrews II

    • PhD in Computer Science
    • Dissertation Title: An Object Description Language for Distributed Discrete Event Simulations

    Sanpawat Kantabutra

    • PhD in Computer Science
    • Dissertation Title: Efficient Representation of Cluster Structure in Large Data Sets

    Vildan Tanriverdi

    • PhD in Computer Science
    • Advisor: Rob Jacob
    • Dissertation Title: A Virtual Reality Interface Design (VRID) Model and Methodology
  • Tamara Babaian

    • PhD in Computer Science
    • Dissertation Title: Knowledge Representation and Open World Planning Using v-forms

    Leonidas Deligiannidis

    • PhD in Computer Science
    • Dissertation Title: DLoVe - A specification paradigm for designing distributed VR applications for single or multiple users

1990s

  • Stephen A Morrison

    • PhD in Computer Science
    • Dissertation Title: A Specification Paradigm for Design and Implementation of non-WIMP Human-Computer Interactions